:: DESCRIPTION
pDRAW32 is a scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates annealing temperatures for PCR. Generates DNA/plasmid plots, virtual agarose gel plots, XY-homology plots – and more!
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
BKChem is a free chemical drawing program.
::DEVELOPER
written by Beda Kosata , currently maintained by Reinis Danne.
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
BKChem is free software.
:: DESCRIPTION
OGDraw (OrganelleGenomeDraw) is a tool that enables the user to quickly generate high-quality graphical maps of circular DNA sequences. Though especially designed and optimized for the display of small organelle genomes like the chloroplast or mitochondrial genome, it is applicable to all circular DNA sequences. The input data can be provided as GenBank files or GenBank accession numbers.
::DEVELOPER
Max Planck Institute for Molecular Plant Physiology
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Nucleic Acids Res, 47 (W1), W59-W64 2019 Jul 2
OrganellarGenomeDRAW (OGDRAW) Version 1.3.1: Expanded Toolkit for the Graphical Visualization of Organellar Genomes
Stephan Greiner , Pascal Lehwark , Ralph Bock
Curr Genet. 2007 Nov;52(5-6):267-74. Epub 2007 Oct 24.
OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes.
Lohse M, Drechsel O, Bock R.
:: DESCRIPTION
WebChem Viewer is a simple, free, open-source program that generates HTML-formatted output that can be viewed in any modern web browser, on any operating system (including mobile), without requiring the installation of additional software. The output can also be easily incorporated into existing web pages.
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
KegDraw is a java application for drawing compound and glycan structures with capabilities to search against the KEGG databases.
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Glycobiology. 2006 May;16(5):63R-70R. Epub 2005 Jul 13.
KEGG as a glycome informatics resource.
Hashimoto K, Goto S, Kawano S, Aoki-Kinoshita KF, Ueda N, Hamajima M, Kawasaki T, Kanehisa M.
:: DESCRIPTION
MolPrime is a chemical structure drawing tool based on the unique sketcher from the Mobile Molecular DataSheet (MMDS). Publication-quality molecular diagrams can be drawn quickly on touchscreen devices of all sizes, using the interface that has been designed from the ground up to make optimal use of gestures and template-guided placement.
::DEVELOPER
Molecular Materials Informatics Inc.
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
JChemPaint (or JCP ) is the editor and viewer for 2D chemical structures developed using CDK. It is implemented in several forms: a Java application and two varieties of Java applet.
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
“JChemPaint – Using the Collaborative Forces of the Internet to Develop a Free Editor for 2D Chemical Structures”
Stefan Krause, Egon Willighagen and Christoph Steinbeck.
Molecules 5, 93-98 (2000).
:: DESCRIPTION
XDrawChem is a two-dimensional molecule drawing program. It is similar in functionality to other molecule drawing programs such as ChemDraw (TM, CambridgeSoft). It can read and write MDL Molfiles, and read ChemDraw text and binary files, to allow sharing between XDrawChem and other chemistry applications, and it can create images in popular formats like PNG and EPS.
::DEVELOPER
Bryan Herger , bherger@users.sourceforge.net
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:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
CGView (Circular Genome Viewer) is a Java application and library for generating high-quality, zoomable maps of circular genomes.Its primary purpose is to serve as a component of sequence annotation pipelines, as a means of generating visual output suitable for the web. Feature information and rendering options are supplied to the program using an XML file, a tab delimited file, or an NCBI ptt file. CGView converts the input into a graphical map (PNG, JPG, or Scalable Vector Graphics format), complete with labels, a title, legends, and footnotes. In addition to the default full view map, the program can generate a series of hyperlinked maps showing expanded views. The linked maps can be explored using any web browser, allowing rapid genome browsing, and facilitating data sharing. The feature labels in maps can be hyperlinked to external resources, allowing CGView maps to be integrated with existing web site content or databases.
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:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Stothard P, Wishart DS.
Circular genome visualization and exploration using CGView.
Bioinformatics 21:537-539.
