ChemDoodle 11.6 – Chemical Drawing Application

ChemDoodle 11.6

:: DESCRIPTION

ChemDoodle is a fully functional chemical drawing application!ChemDoodle also natively reads and writes many common file formats including ChemDraw’s CDX and CDXML. You can write ChemDraw files for submitting journal manuscripts or share these files with your rich friends who purchased ChemDraw. No longer do you need to worry if your colleages are using compatible applications or operating systems.

::DEVELOPER

iChemLabs

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / Mac OsX / IOS/ Andorid
  • Java

:: DOWNLOAD

ChemDoodle free trial

:: MORE INFORMATION

PlasmaDNA 1.4.2 – PLAsmid MAnipulation program

PlasmaDNA 1.4.2

:: DESCRIPTION

PlasmaDNA is a new, free DNA analysis and manipulation software. It is simple to learn and to use, and contains multiple features designed to help with:

The design of a successful cloning strategy
The generation of the sequences of new clones
The archiving of the cloning strategy

::DEVELOPER

Alexandre Angers-Loustau, Ph.D.
+358 9 191 25142
Haartmaninkatu 8
alexandre.angers-loustau (at) helsinki.fi

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac OsX

:: DOWNLOAD

PlasmaDNA

:: MORE INFORMATION

Citation:

Alexandre Angers-Loustau , Jeffrey Rainy and Kirmo Wartiovaara
PlasmaDNA: a free, cross-platform plasmid manipulation program for molecular biology laboratories
BMC Molecular Biology 2007, 8:77

RiboSketch 0.8.2 – Visualization of multi-stranded RNA and DNA Secondary Structure

RiboSketch 0.8.2

:: DESCRIPTION

RiboSketch is a drawing program for the production of RNA and DNA secondary structure images.The user provides an input file (.ct, .bpseq, .dbn, or the save file type .rs) containing the sequence and base-pairing of the strand(s).

::DEVELOPER

Shapiro Group

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux/Windows/MacOsX

:: DOWNLOAD

RiboSketch

:: MORE INFORMATION

Citation:

Lu JS, Bindewald E, Kasprzak WK, Shapiro BA.
RiboSketch: versatile visualization of multi-stranded RNA and DNA secondary structure.
Bioinformatics. 2018 Dec 15;34(24):4297-4299. doi: 10.1093/bioinformatics/bty468. PMID: 29912310; PMCID: PMC6289134.

BIOVIA Draw 2020 – Chemical Structure Drawing Tool

BIOVIA Draw 2020

:: DESCRIPTION

BIOVIA Draw enables scientists to draw and edit complex molecules, chemical reactions and biological sequences with ease, facilitating the collaborative searching, viewing, communicating, and archiving of scientific information.

::DEVELOPER

3DEXPERIENCE

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

BIOVIA Draw

:: MORE INFORMATION

Chem4Word V3.1.19 – Chemistry Add-in for Word

Chem4Word V3.1.19

:: DESCRIPTION

Chem4Word makes it easier to insert and modify chemical information, such as labels, formulas, and 2D depictions, within Microsoft Word. Additionally, it enables the creation of inline “chemical zones,” the rendering of print-ready visual depictions of chemical structures, and the ability to store and expose chemical information in a semantically rich manner.

:: DEVELOPER

Chem4Word Team

:: SCREENSHOTS

Chem4Word

:: REQUIREMENTS

  • Windows
  • Word

:: DOWNLOAD

 Chem4Word

:: MORE INFORMATION

ApE 3.0.3 – A Plasmid Editor

ApE 3.0.3

:: DESCRIPTION

ApE (A Plasmid Editor) is an integrated program for plasmid construction and visualization. It includes a sequence editor, a linear text map identifying sequence features such as restriction sites and ORFs, and a graphic view that highlights sites and features in your sequences. A program designed by a molecular biologist, for molecular biologists.

::DEVELOPER

M. Wayne Davis

:: SCREENSHOTS

:: REQUIREMENTS

  • MacOsX / Windows / Linux
  • Tcl/Tk

:: DOWNLOAD

ApE

:: MORE INFORMATION

SnapGene Viewer 5.3.1 – Create, Browse, and Share richly Annotated DNA Sequence

 SnapGene Viewer 5.3.1

:: DESCRIPTION

SnapGene Viewer is revolutionary software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 Gb in length.

::DEVELOPER

SnapGene

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / MacOSX

:: DOWNLOAD

 SnapGene Viewer

:: MORE INFORMATION

PoseView 1.1.2 – Creates Two-dimensional Diagrams of Complexes with known Complex Structure

PoseView 1.1.2

:: DESCRIPTION

The PoseView automatically creates two-dimensional diagrams of complexes with known 3D structure according to chemical drawing conventions.

::DEVELOPER

Center for Bioinformatics (ZBH), University of Hamburg

:: SCREENSHOTS

PoseView

:: REQUIREMENTS

  • Linux/Windows

:: DOWNLOAD

 PoseView

:: MORE INFORMATION

Citation

Bioinformatics. 2006 Jul 15;22(14):1710-6. Epub 2006 Apr 21.
Molecular complexes at a glance: automated generation of two-dimensional complex diagrams.
Stierand K1, Maass PC, Rarey M.