Sweep 1.1 – Large-scale Analysis of Haplotype Structure

Sweep 1.1

:: DESCRIPTION

Sweep allows large-scale analysis of haplotype structure in genomes for the primary purpose of detecting evidence of natural selection.

::DEVELOPER

Sweep Team

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Mac OsX /Windows

:: DOWNLOAD

 Sweep

:: MORE INFORMATION

 

hitchhiking 1.0 – Software for Simulating Selective Sweeps

hitchhiking 1.0

:: DESCRIPTION

hitchhiking is designed to simulate the following exact and approximate models of selective sweeps

::DEVELOPER

Bernhard Haubold

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 hitchhiking

:: MORE INFORMATION

Citation

Genetics. 2006 Dec;174(4):1995-2008.
Approximate genealogies under genetic hitchhiking.
Pfaffelhuber P1, Haubold B, Wakolbinger A.

SweepFinder 20060814 – Detect the Location of a selective Sweep based on SNP data

SweepFinder 20060814

:: DESCRIPTION

SweepFinder is a program used to detect the location of a selective sweep based on SNP data. It will also estimate the frequency spectrum of observed SNP data in the presence of missing data.

::DEVELOPER

the Nielsen group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX

:: DOWNLOAD

 SweepFinder

:: MORE INFORMATION

Citation:

Nielsen et al. 2005.
Genomic scans for selective sweeps using SNP data.
Genome Research 1566-1575.