SweeD 3.2.1 – a faster version of SweepFinder

SweeD 3.2.1

:: DESCRIPTION

SweeD is a parallel and checkpointable tool that implements a composite likelihood ratio test for detecting selective sweeps.

::DEVELOPER

the Exelixis Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux

:: DOWNLOAD

Sweed

:: MORE INFORMATION

Citation

Mol Biol Evol. 2013 Sep;30(9):2224-34. doi: 10.1093/molbev/mst112.
SweeD: likelihood-based detection of selective sweeps in thousands of genomes.
Pavlidis P, Živkovic D, Stamatakis A, Alachiotis N.

SweepFinder 20060814 – Detect the Location of a selective Sweep based on SNP data

SweepFinder 20060814

:: DESCRIPTION

SweepFinder is a program used to detect the location of a selective sweep based on SNP data. It will also estimate the frequency spectrum of observed SNP data in the presence of missing data.

::DEVELOPER

the Nielsen group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / MacOsX

:: DOWNLOAD

SweepFinder

:: MORE INFORMATION

Citation:

Nielsen et al. 2005.
Genomic scans for selective sweeps using SNP data.
Genome Research 1566-1575.