AFLPsurv 1.0 – Genetic Diversity Analysis with AFLP (and RAPD) Population data

AFLPsurv 1.0

:: DESCRIPTION

AFLP-SURV estimates genetic diversity and population genetic structure from population samples analysed with AFLP or RAPD methods and computes geneitc distance matrices between populations. The program starts by estimating allelic frequencies at each marker locus in each population assuming they are dominant and have only two alleles (a dominant marker allele coding for the presence of a band at a given position and a recessive null allele coding for the absence of the band).

::DEVELOPER

Xavier Vekemans @ the unit of Evolutionary Biology & Ecology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 AFLPsurv

:: MORE INFORMATION

SimHap 1.0.2 – Haplotypic Analysis of Population-based data

SimHap 1.0.2

:: DESCRIPTION

SimHap is a comprehensive modelling framework and a multiple-imputation approach to haplotypic analysis of population-based data.

::DEVELOPER

Centre for Genetic Epidemiology and Biostatistics

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 SimHap

:: MORE INFORMATION

Citation

Carter KW, McCaskie PA, Palmer LJ (2008).
SimHap GUI: An intuitive graphical user interface for genetic association analysis.
BMC Bioinformatics 2008 Dec 25;9(1):557

DHLAS – Web-based Information System for Statistical Genetic Analysis of HLA Population data

DHLAS

:: DESCRIPTION

DHLAS (database HLA system) is a user-friendly, web-based information system for the analysis of human leukocyte antigens (HLA) data from population studies.

::DEVELOPER

Department of Biomathematics. School of Medicine. University of Thessaly.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 DHLAS

:: MORE INFORMATION

Citation

Thriskos P, Zintzaras E, Germenis A.
DHLAS: A web-based information system for statistical genetic analysis of HLA population data.
Comput Methods Programs Biomed. 2007 Mar;85(3):267-72. Epub 2006 Dec 28.