phyclust 0.1-30

:: DESCRIPTION

phyclust (Phyloclustering) is a software package for evolutionary clustering of sequence data.An evolutionary Continuous Time Markov Chain model-based approach is developed to determine population structure from molecular data without assuming linkage equilibrium. The phyclust is designed in C for performance and interfaced with R for visualization, and sets up a common platform and incorporates other popular open source software for simulating data and additional analyses.

::DEVELOPER

Wei-Chen Chen,

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux/windows / MacOsX
• R Package

:: DOWNLOAD

 phyclust

:: MORE INFORMATION

Citation

Chen, W.-C
verlapping Codon model, Phylogenetic Cluetering, and Alternative Partial Expectation Conditional Maximization Algorithm
Ph.D. Diss., Iowa Stat University (2011)