:: DESCRIPTION
EPIG-Seq is an algorithm and software to identify gene expression patterns from RNA-Seq count data. Once the patterns are identified, co-expressed genes are clustered to the patterns.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
BMC Genomics. 2016 Mar 22;17:255. doi: 10.1186/s12864-016-2584-7.
EPIG-Seq: extracting patterns and identifying co-expressed genes from RNA-Seq data.
Li J, Bushel PR.
:: DESCRIPTION
EPIG (Extracting Patterns and Identifying co-expressed Genes) is a method for Extracting microarray gene expression Patterns and Identifying co-expressed Genes. Through evaluation of the correlations among profiles, the magnitude of variation in gene expression profiles, and profile signal-to-noise ratios, EPIG extracts a set of patterns representing co-expressed genes without a pre-defined seeding of the patterns.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
BMC Bioinformatics. 2007 Nov 2;8:427.
Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes.
Chou JW, Zhou T, Kaufmann WK, Paules RS, Bushel PR.
