GAAS 0.17
:: DESCRIPTION
GAAS (Genome relative Abundance and Average Size) is a bioinformatic tool to calculate accurate community composition and average genome size in metagenomes by using BLAST, advanced parsing of hits and correction of genome length bias.
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::DEVELOPER
Florent E. Angly (florent.angly@gmail.com)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows / MacOsX
- Perl
- NCBI BLAST
:: DOWNLOAD
:: MORE INFORMATION
Citation
PLoS Comput Biol. 2009 Dec;5(12):e1000593. Epub 2009 Dec 11.
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Angly FE , et al.