Chromonomer 1.13

:: DESCRIPTION

Chromonomer is a program designed to integrate a genome assembly with a genetic map. Chromonomer tries very hard to identify and remove markers that are out of order in the genetic map, when considered against their local assembly order; and to identify scaffolds that have been incorrectly assembled according to the genetic map, and split those scaffolds.

DEVELOPER

Cresko labs

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

Chromonomer

:: MORE INFORMATION

Citation:

Catchen J, Amores A, Bassham S.
Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny.
G3 (Bethesda). 2020 Nov 5;10(11):4115-4128. doi: 10.1534/g3.120.401485. PMID: 32912931; PMCID: PMC7642942.