transFold – Super-secondary Structure Prediction of Transmembrane β-barrel proteins

transFold

:: DESCRIPTION

transFold is a web server for beta-barrel supersecondary structure prediction. Unlike other software which employ machine learning methods, transFold uses multi-tape S-attribute grammars to describe the space of all possible supersecondary structures, then applies dynamic programming to compute the global energy minimum structure.

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::DEVELOPER

Clote Lab 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

J. Waldispühl, B. Berger, P. Clote, J.-M. Steyaert,
TransFold: a Web Server for predicting the structure and residue contacts of transmembrane beta-barrels,
Nucleic Acids Res. 34(Web Server Issue):189-193 (2006).