targetSeqView – Visualize Next Generation Sequencing Reads over Putative Structural Variants

targetSeqView

:: DESCRIPTION

targetSeqView is a probability-based score and visualization method to aid in distinguishing true structural variants from alignment artifacts.

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::DEVELOPER

targetSeqView team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R

:: DOWNLOAD

  targetSeqView

:: MORE INFORMATION

Citation

Visualization and probability-based scoring of structural variants within repetitive sequences.
Halper-Stromberg E, Steranka J, Burns KH, Sabunciyan S, Irizarry RA.
Bioinformatics. 2014 Jun 1;30(11):1514-21. doi: 10.1093/bioinformatics/btu054.