MicroSNiPer – Prediction of SNP effects on putative microRNA targets

MicroSNiPer

:: DESCRIPTION

MicroSNiPer is a web-based application which predicts the impact of a SNP on putative microRNA targets.

::DEVELOPER

Bioinformatics and Next Generation Sequencing Group; Max Planck Institute of Immunobiology and Epigenetics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

:: MORE INFORMATION

Citation

Hum Mutat. 2010 Nov;31(11):1223-32. doi: 10.1002/humu.21349. Epub 2010 Oct 7.
MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets.
Barenboim M1, Zoltick BJ, Guo Y, Weinberger DR.

:: DESCRIPTION

targetSeqView is a probability-based score and visualization method to aid in distinguishing true structural variants from alignment artifacts.

::DEVELOPER

targetSeqView team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

targetSeqView

:: MORE INFORMATION

Citation

Visualization and probability-based scoring of structural variants within repetitive sequences.
Halper-Stromberg E, Steranka J, Burns KH, Sabunciyan S, Irizarry RA.
Bioinformatics. 2014 Jun 1;30(11):1514-21. doi: 10.1093/bioinformatics/btu054.