VirVarSeq – a low frequency Virus Variant detection pipeline for Illumina data

VirVarSeq

:: DESCRIPTION

VirVarSeq is a toolset designed to call variants at codon level in viral populations from deep sequencing data.

::DEVELOPER

VirTools team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 VirVarSeq

:: MORE INFORMATION

Citation

VirVarSeq: a low frequency Virus Variant detection pipeline for Illumina Sequencing using adaptive base-calling accuracy filtering.
Verbist BM, Thys K, Reumers J, Wetzels Y, Van der Borght K, Talloen W, Aerssens J, Clement L, Thas O.
Bioinformatics. 2014 Aug 31. pii: btu587.