HPM / TreeDT
:: DESCRIPTION
HPM (Haplotype Pattern Mining) is a program for gene mapping in case-control haplotype data.
TreeDT (Tree Disequilibrium Test) extracts, essentially in the form of substrings and prefix trees, information about historical recombinations in the population.
::DEVELOPER
Group of Data mining in genetics
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux /MacOsX
- C Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hannu T. T. Toivonen et al,
Data mining applied to linkage disequilibrium mapping
Am J Hum Genet. 2000 July; 67(1): 133–145.
Sevon et al.
TreeDT: Tree pattern mining for gene mapping”
IEEE/ACM Trans Comput Biol Bioinform. 2006 Apr-Jun;3(2):174-85.