:: DESCRIPTION
MonSTR is a tool for calling de novo mutations from HipSTR or GangSTR VCF files.)
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Mitra I, Huang B, Mousavi N, Ma N, Lamkin M, Yanicky R, Shleizer-Burko S, Lohmueller KE, Gymrek M.
Patterns of de novo tandem repeat mutations and their role in autism.
Nature. 2021 Jan;589(7841):246-250. doi: 10.1038/s41586-020-03078-7. Epub 2021 Jan 13. PMID: 33442040; PMCID: PMC7810352.
:: DESCRIPTION
lobSTR is a tool for profiling Short Tandem Repeats (STRs) from high throughput sequencing data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
lobSTR: A short tandem repeat profiler for personal genomes.
Gymrek M, Golan D, Rosset S, Erlich Y.
Genome Res. 2012 Jun;22(6):1154-62. doi: 10.1101/gr.135780.111.
:: DESCRIPTION
STR_ConvertFormats is an Excel-based tool developed to transform STR typing data from tables where every row contains information from a single locus (e.g., GeneMapperID output format) to a format where every row contains all typing results for a single sample (e.g., Genotyper table format).
::DEVELOPER
Dave Duewer at National Institute of Standards and Technolog
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
See description in Becky Hill presentation at the Expert Systems Workshop held in conjunction with the 2nd Annual Present and Future Technological Advances in Human Identification Conference (Roanoke, VA), March 27, 2006, “NIST Experience with FSS-i3 software“
