:: DESCRIPTION
MetaNetSam is an application for sampling subnetworks from metabolic networks.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
PLoS Comput Biol. 2013;9(3):e1002981. doi: 10.1371/journal.pcbi.1002981. Epub 2013 Mar 21.
Probabilistic inference of biochemical reactions in microbial communities from metagenomic sequences.
Jiao D1, Ye Y, Tang H.
:: DESCRIPTION
TreeSample is a program for simulating phylogenetic trees with a fixed number of species.
::DEVELOPER
Klaas Hartmann, Dennis Wong, Tanja Gernhard
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hartmann, K, Wong, D, Stadler, T,
Sampling Trees from Evolutionary Models,
Syst. Biol. (2010) 59:465-476.
:: DESCRIPTION
Sampling is a software for simulating haplotypes in non-equilibrium subdivided populations.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Thomas Städler, Bernhard Haubold, Carlos Merino, Wolfgang Stephan, and Peter Pfaffelhuber
The impact of sampling schemes on the site-frequency spectrum in non-equilibrium subdivided populations
Genetics May 2009 vol. 182 no. 1 205-216
:: DESCRIPTION
The program sampletrees is a Markov chain Monte Carlo sampler of gene genealogies conditional on either phased or unphased SNP genotype data. The companion program Rsampletrees is for pre- and post-processing of sampletrees files, including setting up the files for sampletrees and storing and plotting the output of a sampletrees run.
::DEVELOPER
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
sampletrees and Rsampletrees: Sampling gene genealogies conditional on SNP genotype data.
Burkett KM, McNeney B, Graham J.
Bioinformatics. 2016 Jan 18. pii: btv763.
