aRNhAck 1.0 – Prediction of RNA-binding interfaces using SHAPE data and MSA

aRNhAck 1.0

:: DESCRIPTION

aRNhAck is a software which illustrates the biological significance of this signal and show that the nucleotides networks calculated with aRNhAck are correlated with nucleotides located in RNA-RNA, RNA-protein, RNA-DNA and RNA-ligand interfaces.

::DEVELOPER

Computer Science and Biology at McGill

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

aRNhAck

:: MORE INFORMATION

Citation:

Nucleic Acids Res. 2016 Jun 20;44(11):e104. doi: 10.1093/nar/gkw217. Epub 2016 Apr 19.
Combining structure probing data on RNA mutants with evolutionary information reveals RNA-binding interfaces.
Reinharz V1, Ponty Y2, Waldispühl J3.