STRUCTURE HARVESTER 0.6.93 – Collating Results Generated by the program STRUCTURE

STRUCTURE HARVESTER 0.6.93

:: DESCRIPTION

STRUCTURE HARVESTER is a web-based program for collating results generated by the program STRUCTURE.The program provides a fast way to assess and visualize likelihood values across multiple values of K and hundreds of iterations for easier detection of the number of genetic groups that best fit the data. In addition, STRUCTURE HARVESTER will reformat data for use in downstream programs, such as CLUMPP.

::DEVELOPER

Dent Earl

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Python

:: DOWNLOAD

  STRUCTURE HARVESTER

:: MORE INFORMATION

Citation

Earl, Dent A. and vonHoldt, Bridgett M. (2012)
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method.
Conservation Genetics Resources vol. 4 (2) pp. 359-361 doi: 10.1007/s12686-011-9548-7

IPRStats 0.4.2 – Visualization of Interproscan Results

IPRStats 0.4.2

:: DESCRIPTION

IPRStats is a tool for the visualization of Interproscan results. Interproscan results are parsed from the Interproscan XML or EBIXML file into an SQLite or MySQL database. The results for each signature database scan are read and displayed as pie-charts or bar charts as summary statistics.

IPRStats Online Version

::DEVELOPER

Iddo Friedberg

:: SCREENSHOTS

IPRStats

:: REQUIREMENTS

  • Windows/ MacOsX / Linux
  • Python

:: DOWNLOAD

 IPRStats

:: MORE INFORMATION

Citation:

Kelly RJ, Vincent DE, Friedberg I.
IPRStats: visualization of the functional potential of an InterProScan run.
BMC Bioinformatics. 2010 Dec 21;11 Suppl 1.S13

PubArray 1.0.0 – Turn Analyzed Results of Microarray Experiment into Web Application

PubArray 1.0.0

:: DESCRIPTION

PubArray is a desktop application that allows you to turn the analyzed results of your microarray experiment into a web application which is accessible via your browser.

::DEVELOPER

The Churchill Group

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • java

:: DOWNLOAD

 PubArray

:: MORE INFORMATION