MIRA
:: DESCRIPTION
The MIRA package aggregates DNA methylation across the genome for instances of a genomic feature like histone ChIP peaks, transcription factor ChIP peaks, or open chromatin regions in order to give a single signature and score for that feature, which may be used to infer regulatory activity.
::DEVELOPER
Sheffield lab of computational biology
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- R
:: DOWNLOAD
:: MORE INFORMATION
Citation
Lawson JT, Tomazou EM, Bock C, Sheffield NC.
MIRA: an R package for DNA methylation-based inference of regulatory activity.
Bioinformatics. 2018 Aug 1;34(15):2649-2650. doi: 10.1093/bioinformatics/bty083. PMID: 29506020; PMCID: PMC6061852.