DNASIZE – Computation of size of DNA and Protein Fragments from Their Electrophoretic Mobility

DNASIZE

:: DESCRIPTION

DNASIZE allows to compute the length of DNA or protein fragments from its electropheric mobility using a graphical method.

::DEVELOPER

G P S Raghava

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • DOS

:: DOWNLOAD

  DNASIZE 

:: MORE INFORMATION

Citation

Raghava, G. P. S. (2001)
A web server for computing size of DNA/Protein fragment using graphical method.
Biotech Software and Internet Report 2:198-200.

ASD – Measuring Global Shape Divergence of Protein Fragments

ASD

:: DESCRIPTION

ASD (Amplitude Spectrum Distance) is a novel way of comparing protein fragments based on the discrete Fourier transform of their C(α) distance matrix.

::DEVELOPER

Clovis Galliez (clovis.galiez@inria.fr)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 ASD

:: MORE INFORMATION

Citation

Amplitude spectrum distance: measuring the global shape divergence of protein fragments.
Galiez C, Coste F.
BMC Bioinformatics. 2015 Aug 14;16:256. doi: 10.1186/s12859-015-0693-y.