IPBT 2.0 – Informative Prior Bayesian Test

IPBT 2.0

:: DESCRIPTION

IPBT, using current public available microarray data, investigates the feasibility and effectiveness of deriving informative priors from historical data and using them in the problem of detecting differentially expressed genes. This package provides users the possibility of using their own historical data or IPHM priors.96 pre-calculated IPBT priors are built in the package.

::DEVELOPER

Ben Li <ben.li@emory.edu>

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • R

:: DOWNLOAD

 IPBT

:: MORE INFORMATION

Citation

Bayesian inference with historical data-based informative priors improves detection of differentially expressed genes.
Li B, Sun Z, He Q, Zhu Y, Qin Z.
Bioinformatics. 2015 Oct 30. pii: btv631.

CladeAge – Divergence Prior Distributions based on a probabilistic model of Fossil Preservation

CladeAge

:: DESCRIPTION

CladeAge is a program that can be used for specifying fossil calibrations on phylogenies when an estimate of a fossil sampling rate is available.

::DEVELOPER

EVOINFORMATICS GROUP

:: SCREENSHOTS

CladeAge

:: REQUIREMENTS

  • MacOsX

:: DOWNLOAD

 CladeAge

:: MORE INFORMATION