DelPhiPKa – Protonation and pKa Calculation Websever

DelPhiPKa

:: DESCRIPTION

Delphi-PKA is a DelPhi-based C++ program, allowing to predict pKa’s for ionizable groups in proteins, RNA and DNA.

::DEVELOPER

Professor Emil Alexov Group

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • C COmpiler

:: DOWNLOAD

 DelPhiPKa

:: MORE INFORMATION

Citation

DelPhiPKa web server: predicting pKa of proteins, RNAs and DNAs.
Wang L, Zhang M, Alexov E.
Bioinformatics. 2015 Oct 29. pii: btv607.

FDDH – pKa calculations with the FD/DH method

FDDH

:: DESCRIPTION

FDDH is a software of pKa calculations with the FD/DH method

::DEVELOPER

Warwicker Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows
  • Fortron

:: DOWNLOAD

  FDDH 

:: MORE INFORMATION

Citation

Proteins. 2011 Dec;79(12):3374-80. doi: 10.1002/prot.23078. Epub 2011 Jun 9.
pKa predictions with a coupled finite difference Poisson-Boltzmann and Debye-Hückel method.
Warwicker J.