:: DESCRIPTION
The PLEX package is designed to perform rapid likelihood analysis on large phylogenies using partial sampling of substitution histories.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2012 Nov 15;28(22):2989-90. doi: 10.1093/bioinformatics/bts555. Epub 2012 Sep 12.
Phylogenetics, likelihood, evolution and complexity.
de Koning AP, Gu W, Castoe TA, Pollock DD.
:: DESCRIPTION
Phylemon is the suite of web-tools for molecular evolution, phylogenetics and phylogenomics. It is conceived as a natural response to the increasing demand of data analysis of experimental scientists seeking to add molecular evolution and phylogenetic insight into their research.
::DEVELOPER
Bioinformatics and Genomics Department at CIPF
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
No, Only Web Service
:: MORE INFORMATION
Citation
Sánchez R, Serra F, Tárraga J, Medina I, Carbonell J, Pulido L, de María A, Capella-Gutíerrez S, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H.
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4. Epub 2011 Jun 6.
:: DESCRIPTION
Mavric is a python module for the manipulation and visualization of phylogenetic trees. It is also a recursive acronym for Mavric Visualizes Rick’s Cladograms :) It aims to be a user-friendly tool for manipulating phylogenetic trees on *NIX-like systems, especially Linux. As such it complements other phylogeny programs like those in the PHYLIP package, which for all their strengths currently lack a nice graphical interface.
::DEVELOPER
Rick Ree rree at oeb.harvard.edu.
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION