:: DESCRIPTION
PMx is a package of demographic and genetic analysis tools to assist with the management of breeding programs for wildlife species.
PMxLite: PMx Made Simpler
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Lacy, R.C., J.D. Ballou, & J.P. Pollak. 2012.
PMx: Software package for demographic and genetic analysis and management of pedigreed populations.
Methods in Ecology & Evolution 3:433-437.
:: DESCRIPTION
FamAgg is an open source R package that contains both established and novel methods to investigate familial aggregation of traits in large pedigrees.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
FamAgg: an R Package to Evaluate Familial Aggregation of Traits in Large Pedigrees.
Rainer J, Taliun D, D’Elia Y, Pattaro C, Domingues FS, Weichenberger CX.
Bioinformatics. 2016 Jan 22. pii: btw019.
:: DESCRIPTION
PEDIG is a fortran software suited to the analysis of very large populations (up to several tens of million individuals).
::DEVELOPER
D. Boichard (contact author), INRA
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
PAP (Pedigree Analysis Package) is a package of programs for computing likelihoods or simulating phenotypes on pedigree members using genetic models. Version 7.1(1) is the latest release in a long line of console-driven implementations. The package may be used for segregation analysis, variance components analysis, linkage analysis, measured genotype analysis, transmission disequilibrium testing, or genetic model fitting. It is distributed as the FORTRAN source. A large suite of examples, keyed to the manual, is included.
jPAP (Java Pedigree Analysis Package) is a document-driven GUI edition of PAP, intended to replace and extend the older console programs.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hum Hered. 2011;72(4):258-63. Epub 2011 Dec 23.
Detecting pleiotropy and epistasis using variance components linkage analysis in jPAP.
Hasstedt SJ, Thomas A.
