:: DESCRIPTION
JAMSS is a fast, self-contained in silico simulator capable of generating simulated MS and LC- MS runs while providing meta information on the provenance of each generated signal.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2014 Nov 3. pii: btu729.
JAMSS: Proteomics Mass Spectrometry Simulation in Java.
Smith R1, Prince JT
:: DESCRIPTION
The ms_lims project provides a lightweight, portable yet production-grade solution for managing mass spectrometry based proteomics data.
::DEVELOPER
Computational Omics and Systems Biology Group
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Proteomics. 2010 Mar;10(6):1261-4.
ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics.
Helsens K, Colaert N, Barsnes H, Muth T, Flikka K, Staes A, Timmerman E, Wortelkamp S, Sickmann A, Vandekerckhove J, Gevaert K, Martens L.
:: DESCRIPTION
mmass is a software by a mass spectrometrist that is an excellent mass spectrum viewer with other features related to proteomics;
::DEVELOPER
Martin Strohalm, PhD.
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
mMass as a Software Tool for the Annotation of Cyclic Peptide Tandem Mass Spectra
Niedermeyer THJ and Strohalm M
PLoS ONE 7 (9), e44913 (2012)
:: DESCRIPTION
MetaPepSeq is metaserver for protein identification in Mass Spectrometry Experiments. It helps joining the power of Mascot and de novo sequencing algorithms by merging together into one tool.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
MassSorter is a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
MassSorter: a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences
Harald Barsnes, Svein-Ole Mikalsen and Ingvar Eidhammer
BMC Bioinformatics 2006, 7:42
:: DESCRIPTION
BayesMix-MS is a piece of computer software which can be used as a tool for the analysis of Mass Spectrometry Proteomics data.
::DEVELOPER
:: SCREENSHOTS
N/A
: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Kim-Anh Do, Peter Mueller, Raj Bandyopadhya, Keith Baggerly (2008).
A Bayesian mixture model for protein biomarker discovery
Bayesian Modeling in Bioinformatics, Dey DK, Ghosh D, Mallick B (Eds), Chapman & Hall / CRC press
