Kaks_Calculator 2.0
:: DESCRIPTION
KaKs_Calculator adopts model selection and model averaging to calculate nonsynonymous (Ka) and synonymous (Ks) substitution rates, attempting to include as many features as needed for accurately capturing evolutionary information in protein-coding sequences. In addition, several existing methods for calculating Ka and Ks are also incorporated into KaKs_Calculator.
::DEVELOPER
The National Genomics Data Center
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Genomics Proteomics Bioinformatics. 2010 Mar;8(1):77-80. doi: 10.1016/S1672-0229(10)60008-3.
KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies.
Wang D1, Zhang Y, Zhang Z, Zhu J, Yu J.
Zhang Zhang, Jun Li,Xiao-QianZhao,etal.
KaKs_Calculator: calculating Ka and Ks through model selection and model averaging
Geno. Prot. Bioinfo.,2006,4(4)