MSPocket 1.1 – Detection and Graphical Analysis of Protein Surface Pockets

MSPocket 1.1

:: DESCRIPTION

MSPocket is an orientation independent program for the detection and graphical analysis of protein surface pockets.

::DEVELOPER

Zhu, Hongbo.

:: SCREENSHOTS

MSPocket

:: REQUIREMENTS

  • Linux / Windows /Mac OsX
  • Python
  • Biopython
  • MSMS
  • PyMOL

:: DOWNLOAD

 MSPocket

:: MORE INFORMATION

Citation

Zhu H, Pisabarro MT.
MSPocket: an orientation-independent algorithm for the detection of ligand binding pockets.
Bioinformatics. 2011 Feb 1;27(3):351-8.

SDAR 5.2 – Graphical Analysis of Two-dimensional Data

SDAR 5.2

:: DESCRIPTION

SDAR (Serial Data Analysis and Regression) is a simple-to-use and portable Java application with an emphasis on intuitive usability and quick access to a variety of laboratory-derived raw data. Data can be manipulated and analysed with respect to common operations. Images of the data plots can be generated in SVG-, TIFF- or PNG-format.

::DEVELOPER

Hofmann Laboratory, Eskitis Institute

:: SCREENSHOTS

 SDAR

:: REQUIREMENTS

  • linux/ Windows/ MacOsX
  • Java

:: DOWNLOAD

 SDAR

 :: MORE INFORMATION

Citation

Weeratunga, S.K., Hu, N.J., Simon, A., Hofmann, A. (2012)
SDAR: a practical tool for graphical analysis of two-dimensional data.
BMC Bioinformatics 13, 201.