:: DESCRIPTION
PALMA aligns two genomic sequences in an optimal way according to its underlying algorithm and trained parameters.
::DEVELOPER
the Biomedical Informatics Lab
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2007 Aug 1;23(15):1892-900. Epub 2007 May 30.
PALMA: mRNA to genome alignments using large margin algorithms.
Schulze U, Hepp B, Ong CS, Rätsch G.
:: DESCRIPTION
AuberGene is a genome alignment program which explores the idea of transitivity of local alignments. Even though it uses pairwise alignments generated by other genome alignment programs, it produces more sensitive and specific alignments by integrating the information from multiple genomes.
::DEVELOPER
The Centre for Integrative Bioinformatics VU
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Szklarczyk, R., Heringa, J.,
AuberGene – a sensitive genome alignment tool,
Bioinformatics, 15 June 2006; 22: 1431 – 1436
