:: DESCRIPTION
GAPlus is an enhanced genetic algorithm (GA) for lattice based Protein Structure Prediction (PSP).
::DEVELOPER
Hoque’s Lab, University of New Orleans
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
“An Enhanced Genetic Algorithm for Ab initio Protein Structure Prediction”
Mahmood A. Rashid, Firas Khatib, Md Tamjidul Hoque and Abdul Sattar.
IEEE Transactions on Evolutionary Computation, Accepted (2015)
:: DESCRIPTION
GAGA is a program developed to partition a distance matrix between pairs of objects into K clusters in order to minimize the amount of mean differences within each group (SSD'(WP) statistic).
::DEVELOPER
Dept Genetic Identification ErasmusMC Rotterdam
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
GAGA: a new algorithm for genomic inference of geographic ancestry reveals fine level population substructure in Europeans.
Lao O, Liu F, Wollstein A, Kayser M.
PLoS Comput Biol. 2014 Feb 20;10(2):e1003480. doi: 10.1371/journal.pcbi.1003480.
:: DESCRIPTION
GARM, a Genetic Algorithm for creation of Resistance Maps. The main motivation behind GARM is to begin to help remove the influence of ‘expert opinion’ on landscape resistance maps and allow users to input large numbers of environmental layers.
::DEVELOPER
the Computational Ecology Lab, The University of Montana
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hand BK, Raiford D, Landguth EL, Glassy J. (2013)
GARM: A genetic algorithm for resistance map creation.
in prep.
:: DESCRIPTION
GAME (Genetic Algorithm based Motif Elicitation)is a software which utilizes a genetic algorithm to find motifs (statistically over-represented patterns) in a set of related DNA sequences. As one application, motifs could be transcription factor binding sites in a set of co-regulated genes.
::DEVELOPER
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Wei Z and Jensen ST,
GAME: Detecting Cis-regulatory Elements Using a Genetic Algorithm,
Bioinformatics, 2006 22:1577-1584,
