GAME – Utilize Genetic Algorithm to Find Motifs

GAME

:: DESCRIPTION

GAME (Genetic Algorithm based Motif Elicitation)is a software which utilizes a genetic algorithm to find motifs (statistically over-represented patterns) in a set of related DNA sequences. As one application, motifs could be transcription factor binding sites in a set of co-regulated genes.

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::DEVELOPER

Zhi Wei

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Java

:: DOWNLOAD

  GAME

:: MORE INFORMATION

Citation

Wei Z and Jensen ST,
GAME: Detecting Cis-regulatory Elements Using a Genetic Algorithm,
Bioinformatics, 2006 22:1577-1584,

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