TDFragMapper 1.0 – Visualization tool for Evaluating Experimental parameters in top-down Proteomics

TDFragMapper 1.0

:: DESCRIPTION

TDFragMapper can deal with multiple fragmentation methods and can rapidly highlight the experimental fragmentation parameters that are critical to the characterization of intact proteins of various size using top-down proteomics.

::DEVELOPER

MSBIO – INSTITUT PASTEUR

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows
  • The .NET framework

:: DOWNLOAD

TDFragMapper

:: MORE INFORMATION

Citation

Dhenin J, Lima DB, Dupré M, Chamot-Rooke J.
TDFragMapper: a visualization tool for evaluating experimental parameters in top-down proteomics.
Bioinformatics. 2021 Nov 18:btab784. doi: 10.1093/bioinformatics/btab784. Epub ahead of print. PMID: 34792554.

QiSampler 20111215 – Evaluate Prioritization Done by Scoring Schemes and Experimental Parameters of High Throughput Biological Datasets

QiSampler 20111215

:: DESCRIPTION

QiSampler evaluates the prioritization done by experimental parameters of high throughput biological datasets.

::DEVELOPER

Computational Biology and Data Mining (CBDM) Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 QiSampler

:: MORE INFORMATION

Citation

BMC Res Notes. 2011 Mar 9;4:57.
QiSampler: evaluation of scoring schemes for high-throughput datasets using a repetitive sampling strategy on gold standards.
Fontaine JF, Suter B, Andrade-Navarro MA.