EPGA2
:: DESCRIPTION
EPGA is an algorithm which extracts paths from De Bruijn graph for genome assembly.
EPGA2 updates some modules in EPGA which can improve memory efficiency in genome asssembly.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows/ MacOsX
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
EPGA2: memory-efficient de novo assembler.
Luo J, Wang J, Li W, Zhang Z, Wu FX, Li M, Pan Y.
Bioinformatics. 2015 Aug 26. pii: btv487
EPGA: de novo assembly using the distributions of reads and insert size.
Luo J, Wang J, Zhang Z, Wu FX, Li M, Pan Y.
Bioinformatics. 2014 Nov 17. pii: btu762