Circlator 1.5.6
:: DESCRIPTION
Circlator is the first tool to automate assembly circularization and produce accurate linear representations of circular sequences.
::DEVELOPER
Pathogen Informatics, Wellcome Trust Sanger Institute
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX
- Python
- BWA version >= 0.7.12
- prodigal version >= 2.6
- SAMtools (version 0.1.9 or 1.2)
- MUMmer version >= 3.23
- SPAdes version 3.5.0, 3.6.0 or 3.6.2
:: DOWNLOAD
:: MORE INFORMATION
Citation
Circlator: automated circularization of genome assemblies using long sequencing reads.
Hunt M, Silva ND, Otto TD, Parkhill J, Keane JA, Harris SR.
Genome Biol. 2015 Dec 29;16(1):294. doi: 10.1186/s13059-015-0849-0.