CCTop 1.0.0 – CRISPR/Cas9 Target Online Predictor

CCTop 1.0.0

:: DESCRIPTION

CCTop is a CRISPR/Cas9 target online predictor

::DEVELOPER

The Centre for Organismal Studies (COS) Heidelberg

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

CCTop

:: MORE INFORMATION

Citation

CCTop: An Intuitive, Flexible and Reliable CRISPR/Cas9 Target Prediction Tool.
Stemmer M, Thumberger T, Del Sol Keyer M, Wittbrodt J, Mateo JL.
PLoS One. 2015 Apr 24;10(4):e0124633. doi: 10.1371/journal.pone.0124633.

CaRpools 1.025 – Analysis CRISPR/Cas9 Pooled Screens

CaRpools 1.025

:: DESCRIPTION

CaRpools is an R package forexploratory data analysis of pooled CRISPR/Cas9 screens.

::DEVELOPER

Boutroslab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R

:: DOWNLOAD

CaRpools

:: MORE INFORMATION

Citation

caRpools: An R package for exploratory data analysis and documentation of pooled CRISPR/Cas9 screens.
Winter J, Breinig M, Heigwer F, Brügemann D, Leible S, Pelz O, Zhan T, Boutros M.
Bioinformatics. 2015 Oct 27. pii: btv617.

WU-CRISPR – WashU gRNA Designer for CRISPR/Cas9 Knockout

WU-CRISPR

:: DESCRIPTION

WU-CRISPR is the Washington University gRNA designer for CRISPR/Cas9 knockouts.

::DEVELOPER

Xiaowei Wang Ph.D.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 WU-CRISPR

:: MORE INFORMATION

Citation

WU-CRISPR: characteristics of functional guide RNAs for the CRISPR/Cas9 system.
Wong N, Liu W, Wang X.
Genome Biol. 2015 Nov 2;16(1):218. doi: 10.1186/s13059-015-0784-0.