Broad-Enrich 2.14.0 – Gene Set Enrichment Testing for Sets of Broad Genomic Regions

Broad-Enrich 2.14.0

:: DESCRIPTION

Broad-Enrich tests sets of broad genomic regions (e.g., from ChIP-seq data for histone modifications or copy number variations) for enriched biological pathways, Gene Ontology terms, or other gene sets.

::DEVELOPER

The Sartor Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows / MacOsX
  • R

:: DOWNLOAD

 Broad-Enrich

:: MORE INFORMATION

Citation

Broad-Enrich: functional interpretation of large sets of broad genomic regions.
Cavalcante RG, Lee C, Welch RP, Patil S, Weymouth T, Scott LJ, Sartor MA.
Bioinformatics. 2014 Sep 1;30(17):i393-i400. doi: 10.1093/bioinformatics/btu444.