BatMeth 1.04b – Improved Mapper for Bisulfite Sequencing Reads on DNA Methylation

BatMeth 1.04b

:: DESCRIPTION

BatMeth is an algorithm that integrates novel mismatch counting, list filtering, mismatch stage filtering and fast mapping onto two indexes to improve unique mapping rate, speed and precision.

::DEVELOPER

Sung Wing Kin, Ken

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 BatMeth

:: MORE INFORMATION

Citation

Genome Biol. 2012 Oct 3;13(10):R82. [Epub ahead of print]
BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation.
Lim JQ, Tennakoon C, Li G, Wong E, Ruan Y, Wei CL, Sung WK.