DIAMOND v2.0.12 / AC-DIAMOND v1.0
:: DESCRIPTION
DIAMOND is a sequence aligner for protein and translated DNA searches, designed for high performance analysis of big sequence data.
AC-DIAMOND attempts to speed up DIAMOND via better SIMD parallelization and compressed indexing.
::DEVELOPER
the Algorithms in Bioinformatics lab. / Huijun Mai
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Buchfink B, Xie C, Huson DH.
Fast and sensitive protein alignment using DIAMOND.
Nat Methods. 2015 Jan;12(1):59-60. doi: 10.1038/nmeth.3176. Epub 2014 Nov 17. PMID: 25402007.
Mai H, Zhang Y, Li D, Leung HC, Luo R, Wong CK, Ting HF, Lam TW.
AC-DIAMOND v1: accelerating large-scale DNA-protein alignment.
Bioinformatics. 2018 Nov 1;34(21):3744-3746. doi: 10.1093/bioinformatics/bty391. PMID: 29771282.