SQUID v1.5 – Structural Variant Detection from RNA-seq

SQUID v1.5

:: DESCRIPTION

SQUID is designed to detect both fusion-gene and non-fusino-gene transcriptomic structural variations from RNA-seq alignment.

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::DEVELOPER

Kingsford Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOs

:: DOWNLOAD

SQUID

:: MORE INFORMATION

Citation

Genome Biol. 2018 Apr 12;19(1):52. doi: 10.1186/s13059-018-1421-5.
SQUID: transcriptomic structural variation detection from RNA-seq.
Ma C, Shao M, Kingsford C.

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