SAD

:: DESCRIPTION

SAD detects the potential misquantifications for the RNA-seq transcript expression estimation made by Salmon. SAD detects large deviation of the observed coverage distribution from the expected coverage distribution for each transcript, and use the deviation as an indicator of misquantifications.

::DEVELOPER

Kingsford Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / MacOs

:: DOWNLOAD

SAD

:: MORE INFORMATION

Citation

Cong Ma, Carl Kingsford (2019).
Detecting, categorizing, and correcting coverage anomalies of RNA-seq quantification.
Cell Systems, in press..