SeSAW 2.0 – Functional Mapping by Sequence-Derived Structural Alignment Weights

SeSAW 2.0

:: DESCRIPTION

SeSAW (sequence-derived structural alignment weights) is a web-based program for identifying functionally or evolutionarily conserved motifs in protein structures by locating sequence and structural similarities, and quantifying these at the level of individual residues. Results can be visualized in 2D, as annotated alignments, or in 3D, as structural superpositions. An example is given for both an experimentally determined query structure and a homology model.

Advertisement

::DEVELOPER

Department of Genome Informatics; Research Institute for Microbial Diseases; Osaka University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

SeSAW: balancing sequence and structural information in protein functional mapping.
Standley DM, Yamashita R, Kinjo AR, Toh H, Nakamura H.
Bioinformatics. 2010 May 1;26(9):1258-9. Epub 2010 Mar 17.