Salmon v1.0.0

:: DESCRIPTION

Salmon is a tool for quantifying the expression of transcripts using RNA-seq data. Salmon uses new algorithms (specifically, coupling the concept of quasi-mapping with a two-phase inference procedure) to provide accurate expression estimates very quickly (i.e. wicked-fast) and while using little memory. Salmon performs its inference using an expressive and realistic model of RNA-seq data that takes into account experimental attributes and biases commonly observed in real RNA-seq data.

::DEVELOPER

Kingsford Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / MacOs

:: DOWNLOAD

Salmon

:: MORE INFORMATION

Citation

Rob Patro, Geet Duggal, Michael I Love, Rafael A Irizarry, Carl Kingsford (2017).
Salmon provides fast and bias-aware quantification of transcript expression.
Nature Methods 14:417-419.