PennSeq
:: DESCRIPTION
PennSeq is a statistical method that allows each isoform to have its own non-uniform read distribution.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows
- Perl
:: DOWNLOAD
:: MORE INFORMATION
Citation
Nucleic Acids Res. 2014 Feb;42(3):e20. doi: 10.1093/nar/gkt1304. Epub 2013 Dec 20.
PennSeq: accurate isoform-specific gene expression quantification in RNA-Seq by modeling non-uniform read distribution.
Hu Y1, Liu Y, Mao X, Jia C, Ferguson JF, Xue C, Reilly MP, Li H, Li M.