RNAcop 1.0.3 – Optimizing RNA structures by Sequence Extensions

RNAcop 1.0.3

:: DESCRIPTION

RNAcop (RNA Context Optimization by Probability) is a tool for optimizing lengths of flanking regions up- and downstream of a constrained structure with respect to the probability of folding into the structure.

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::DEVELOPER

Center for non-coding RNA in Technology and Health (RTH)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 RNAcop

:: MORE INFORMATION

Citation

Optimizing RNA structures by sequence extensions using RNAcop.
Hecker N, Christensen-Dalsgaard M, Seemann SE, Havgaard JH, Stadler PF, Hofacker IL, Nielsen H, Gorodkin J.
Nucleic Acids Res. 2015 Sep 30;43(17):8135-45. doi: 10.1093/nar/gkv813.