Readscan 0.5 – Pathogen Discovery program with accurate genome relative abundance estimation.

Readscan 0.5

:: DESCRIPTION

READSCAN is a highly scalable parallel program to identify non-host sequences (of potential pathogen origin) and estimate their genome relative abundance in high-throughput sequence datasets.

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:DEVELOPER

Computational Bioscience Research Center ,  King Abdullah University of Science and Technology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  MacOsX
  • Perl

:: DOWNLOAD

 Readscan

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Feb 1;29(3):391-2. doi: 10.1093/bioinformatics/bts684. Epub 2012 Nov 28.
READSCAN: a fast and scalable pathogen discovery program with accurate genome relative abundance estimation.
Naeem R, Rashid M, Pain A.