FTProd – Binding Site Comparison across Multiple Structures

FTProd

:: DESCRIPTION

This is FTProd, a plugin for VMD designed to characterize and identify cross-structural ‘hot spots’ in proteins. The program FTMAP identifies these druggable hot spots by docking a series of small molecular probes onto the protein surfaces. FTProd combines these output structures, clusters them, and displays them visually for easy comparison.

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::DEVELOPER

The Amaro lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / WIndows
  • VMD

:: DOWNLOAD

FTProd

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Feb 1;29(3):393-4. doi: 10.1093/bioinformatics/bts689. Epub 2012 Nov 29.
Multistructural hot spot characterization with FTProd.
Votapka L, Amaro RE.