Pseudomarker 2.0 – Joint Linkage / Linkage Disequilibrium Analysis

Pseudomarker 2.0

:: DESCRIPTION

PSEUDOMARKER is linkage analysis software for joint Linkage and LD analysis for qualitative traits. Pseudomarker can analyze different data structures jointly such as cases and controls, trios, sib pairs, sib ships and extended families. Pseudomarker is family-based association test.

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::DEVELOPER

Tero Hiekkalinna , Joseph D. Terwilliger and Petri Norrgrann.

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows

:: DOWNLOAD AUTOSCAN

Pseudomarker

:: MORE INFORMATION

Citaiton

PSEUDOMARKER 2.0: efficient computation of likelihoods using NOMAD.
Gertz EM, Hiekkalinna T, Digabel SL, Audet C, Terwilliger JD, Schäffer AA.
BMC Bioinformatics. 2014 Feb 17;15:47. doi: 10.1186/1471-2105-15-47.

Harald H. H. Göring and Joseph D. Terwilliger
Linkage Analysis in the Presence of Errors IV: Joint Pseudomarker Analysis of Linkage and/or Linkage Disequilibrium on a Mixture of Pedigrees and Singletons When the Mode of Inheritance Cannot Be Accurately Specified.
American Journal of Human Genetics 66:1310-1327, 2000

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