NSMAP 0.1.0 – Spliced Isoforms Identification and Quantification from RNA-Seq

NSMAP 0.1.0

:: DESCRIPTION

NSMAP (Nonnegativity and Sparsity constrained Maximum A Posteriori ) is designed to identify and quantify isoforms from RNA-seq by incorporating a sparsity term into expression level estimation to enable isoform structure prediction and expression estimation simultaneously.

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::DEVELOPER

Center for Bioinformatics & Systems Biology, The Methodist Hospital Research Institute.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 NSMAP

:: MORE INFORMATION

Citation

Zheng Xia, Jianguo Wen, Chung-Che Chang, and Xiaobo Zhou,
“NSMAP: A Method for Spliced Isoforms Identification and Quantification from RNA-Seq
BMC Bioinformatics 2011, 12:162