MethMarker 1.0.680
:: DESCRIPTION
MethMarker facilitates the design of DNA methylation assays for COBRA, bisulfite SNuPE, bisulfite pyrosequencing, MethyLight and MSP. It also implements a systematic workflow for design, optimization and (computational) validation of DNA methylation biomarkers. This workflow starts from a preselected differentially methylated region (DMR) and results in an optimized DNA methylation assay that is ready to be tested in a large-scale clinical trial.
::DEVELOPER
Peter Schüffler, Christoph Bock, Thomas Mikeska and Thomas Lengauer , Max-Planck-Institut Informatik
:: SCREENSHOTS
:: REQUIREMENTS
- Windows / Linux / Mac OsX
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation:
MethMarker: User-friendly design and optimization of gene-specific DNA methylation assays
Peter Schüffler, Thomas Mikeska, Andreas Waha, Thomas Lengauer, Christoph Bock
Genome Biology 2009, 10:R105doi:10.1186/gb-2009-10-10-r105