jLSTM / LSTM
:: DESCRIPTION
jLSTM is the recommended new JAVA-package of “Long Short-Term Memory” for Protein classification (jLSTM_protein). The implementation of the LSTM neural network is the same as in the C package and performs and behaves identically but faster. jLSTM_protein is multithreaded and therefore uses effectively multicore and -processor machines.
LSTM logistic regression / spectrum kernel is a stripped down LSTM which can be interpreted as logistic regression with the spectrum kernel for sequence classification.
::DEVELOPER
Institute of Bioinformatics, Johannes Kepler University Linz
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Sepp Hochreiter, Martin Heusel, and Klaus Obermayer.
“Fast Model-based Protein Homology Detection without Alignment.”
Bioinformatics (2007) 23 (14): 1728-1736..