TiMAT 3.4.4

:: DESCRIPTION

TiMAT is an open-source, Java based set of scripts used for processing chip-chip tiling array experiments. Its four main functionalities are (1) smooth noisy signals, (2) optionally calculate false discovery rates, (3) identify enriched intervals and (4) identify peaks within these enriched intervals. While parts of TiMAT might be used in analyzing expression arrays, other parts, such as the symmetric null-p calculations are not appropriate for such experiments– TiMAT is designed for chip-chip experiments.

::DEVELOPER

the Berkeley Drosophila Transcription Network Project,

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows / Linux / Mac OsX
• Java

:: DOWNLOAD

 TiMAT

:: MORE INFORMATION